Re: [Freesurfer] Error in hippocampal subfields longitudinal processing

2021-07-29 Thread Kaija Sander
External Email - Use Caution Oh my goodness silly me, I just realised where I went wrong... So sorry! It does appear to be working now, so fingers crossed I can finish off my subjects. Thank you so much!! Kaija From: Hoopes, Andrew Sent: 29 July

Re: [Freesurfer] Error in hippocampal subfields longitudinal processing

2021-07-29 Thread Hoopes, Andrew
The line of code you sent doesn’t seem changed though best andrew From: Kaija Sander Date: Thursday, July 29, 2021 at 5:40 PM To: Hoopes, Andrew , Freesurfer support list Cc: Iglesias Gonzalez, Juan E. Subject: Re: [Freesurfer] Error in hippocampal subfields longitudinal processing

Re: [Freesurfer] Error in hippocampal subfields longitudinal processing

2021-07-29 Thread Kaija Sander
External Email - Use Caution Hi Andrew, I just meant that upon going to make those changes, it appears the change has already been made, therefore I am not entirely sure what the issue is... Best, Kaija From: Hoopes, Andrew Sent: 29 July 2021

Re: [Freesurfer] Error in hippocampal subfields longitudinal processing

2021-07-29 Thread Hoopes, Andrew
Hi Kaija, Not sure I follow. Have you tried making the change I suggested in the last email? Best, Andrew From: Kaija Sander Date: Wednesday, July 28, 2021 at 2:30 PM To: Freesurfer support list Cc: Hoopes, Andrew , Iglesias Gonzalez, Juan E. Subject: Re: [Freesurfer] Error in hippocampal

Re: [Freesurfer] Mac install of Freesurfer 7.2.0 - Freeview quitsunexpectedly

2021-07-29 Thread Adam Martersteck
External Email - Use Caution Here's a log from a completely clean install of FreeSurfer 7.2.0. On an Intel processor MacBook Pro, running macOS Big Sur (11.4). __Starting with a completely clean install of FreeSurfer 7.2.0__ Copied license file over from 7.1.1. (Confirmed

[Freesurfer] Medical Imaging Analyst Position - Department of Radiology

2021-07-29 Thread Sneha Pandya
External Email - Use Caution The Division of Medical Nuclear Physics in the Department of Radiology at Weill Cornell Medicine is seeking a full-time Medical Imaging Analyst to support its active research program in PET and Nuclear Medicine. Interested individuals must have at

Re: [Freesurfer] Analysing HCP Data in freesurfer

2021-07-29 Thread Glasser, Matthew
External Email - Use Caution It might be easier to use the HCP’s TaskAnalysis Pipeline (of which there will be a new version in the master development branch shortly that has improvements for the HCP Lifespan projects), as that is designed to work directly with the other

Re: [Freesurfer] Analysing HCP Data in freesurfer

2021-07-29 Thread Poortata Shirish Lalwani
External Email - Use Caution I am trying to analyse the HCP-Aging vismotor task fMRI data

Re: [Freesurfer] Analysing HCP Data in freesurfer

2021-07-29 Thread Glasser, Matthew
External Email - Use Caution I’m not sure anyone has tried this yet. Which data are you trying to analyze? I cannot tell from the below what type of data this is. Matt. From: on behalf of Poortata Shirish Lalwani Reply-To: Freesurfer support list Date: Thursday, July 29,

[Freesurfer] Analysing HCP Data in freesurfer

2021-07-29 Thread Poortata Shirish Lalwani
External Email - Use Caution Hello, I am trying to use fsfast to perform 1st level GLM analysis on preprocessed data from the HCP-Aging dataset which happens to be in a different space than fsaverage. I followed the following steps: First I smoothed the data which was in dtseries