+Greve%22>
Tue, 21 Feb 2017 12:53:08
-0800<http://www.mail-archive.com/search?l=freesurfer@nmr.mgh.harvard.edu=date:20170221>
That four group test will yield the same exact result as
1 -1 0 0
1 0 -1 0
1 0 0 -1
so I think you are ok
From: "Gold, Andrea (NIH/NIMH) [F]"
Hi,
I am trying to run a cortical thickness analysis comparing four groups – my
goal is to conduct an omnibus F-test testing for any group differences. I have
0 covariates/nuisance regressors.
This would be equivalent to the “Contrast 4 group.effect.mtx” in this page, for
3 groups:
Hi,
I have a question about correcting for 2 hemispheres in a thickness
analysis using a PFC mask. Here are the steps I ran:
1) I ran the analysis in qdec without a mask.
2) I found the mri_glmfit.log file from step 1 and cut out the mri_glmfit
command that runs the analysis and
replaced
Hi,
I’m trying to extract the average thickness per subject in significant clusters
from a Qdec analysis, and hope to clarify 2 things re: the
“cache.th13.abs.y.ocn.dat“ output from this command:
mri_glmfit-sim --glmdir (dir) --cache 1.3 abs --cwp 0.05 —2spaces
I’ve attached all relevant
Hi,
I am trying to show 3 aparc labels on the inflated surface, each in a different
color, let’s say lh.inferiortemporal, lh.middletemporal and lh.superiortemporal
.
I have 2 questions:
First I ran mris_annotation2label to extract the individual region aparc labels.
I can merge them into a
response, I missed this email in the daily digest.
Thanks,
Andrea
From: "Gold, Andrea (NIH/NIMH) [F]"
<andrea.g...@nih.gov<mailto:andrea.g...@nih.gov>>
Date: Monday, October 5, 2015 at 12:58 PM
To: "freesurfer@nmr.mgh.harvard.edu<mailto:freesurfer@nmr.
Hi,
I got the following error during my first time running the mri_glmfit command:
mri_glmfit --y Model1_Maltx_ParentEd_Sex_Age_n58-lh-thickness.mgh --fsgd
Model1_Maltx_ParentEd_Sex_Age_n58.fsgd --C Model1_Maltx.mtx --C
Model1_ParentEd.mtx --surf fsaverage lh --glmdir
