Hello All,
I have a library problem when I run recon-all. Recon-all exits with
ERROR during the cortribbon step. I am using FC8 x86_64 OS on an Intel
Xeon 64 bit machine. I have installed CentOS4-x86_64-v4.0.2 version of
freesurfer. The library in question libexpat.so.0 has been installed
and is
Hello All,
I have a library problem when I run recon-all. Recon-all exits with
ERROR during the cortribbon step. I am using FC8 x86_64 OS on an Intel
Xeon 64 bit machine. I have installed CentOS4-x86_64-v4.0.2 version of
freesurfer. The library in question libexpat.so.0 has been installed
and is
Hi all,
I am facing the same problem with CentOS 5 and tksurfer.Is there any fix
for this problem?
Thank you,
-Dhruman
-Original Message-
From: [EMAIL PROTECTED]
[mailto:[EMAIL PROTECTED] On Behalf Of Nick
Schmansky
Sent: Tuesday, February 19, 2008 10:03 AM
To: [EMAIL PROTECTED]
Cc:
Hello All,
I have a P4 1.5 GHZ, 1GB ram, 65GB hard disk running redhat fedora core
release 5. I am planning to install the latest version of freesurfer on
it. It will be a dedicated system for a small study with the only task
of processing the data on freesurfer. Will this work? I understand that
Hi all,
I am interested in lobe wise surface measurement. I read Desikan
et al. paper to understand that their atlas divides the lobes into different
region and freesurfer uses that atlas to gets measurement for each region. Is
it possible to load the Desikan label and edit it to fuse all
Message-
From: Rahul Desikan [mailto:[EMAIL PROTECTED]
Sent: Thursday 27 July 2006 15:15
To: Goradia, Dhruman D
Cc: freesurfer@nmr.mgh.harvard.edu
Subject: Re: [Freesurfer] Edit label
Hi Dhruman,
If you are interested in lobe-wise comparisons, you can indeed add up
the
individual regions
Hi all,
Can anyone tell me how freesurfer defines Intracranial
volume, Brain segmentation volume and Brain mask volume? What is the difference
between the 3 measures?
-Dhruman
___
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
I have a freesurfer version that was released in Feb. (I think the
version is 3.0 dev). I looked in the bin and could not find
asegstat2table and aparcstat2table function files. Is it possible for
anyone to send those files? Also, will those file be compatible with the
version of freesurfer I am
Hello all,
The output of mris_anatomical_stats has a measurement called
TotalWhiteMatterVolume for each hemisphere. From aseg.stat the measures for
cerebellum-white volume and cerebral-white volume for each hemisphere can be
obtain, but the sum of both the measures obtained from aseg is
Hi all,
In the aseg.stats file there is a measurement called Brain
segmentation volume. Can someone tell me what it is? Is this same as whole brain
GM volume? If not is there a way to compute that?
-Dhruman
___
Freesurfer mailing list
Hello Bruce and all,
Is it possible to perform group analysis based only on a particular
subcortical region of interest and visualize it?
-Dhruman
-Original Message-
From: [EMAIL PROTECTED]
[mailto:[EMAIL PROTECTED] On Behalf Of Bruce
Fischl
Sent: Monday 20 March 2006 16:20
To:
.
-Dhruman
-Original Message-
From: Daniel Goldenholz [mailto:[EMAIL PROTECTED]
Sent: Tuesday 21 March 2006 11:25
To: Goradia, Dhruman D
Subject: Re: [Freesurfer] Faster and Parallel recon-all
Dhruman
That's confusing. I think you should take one line of executable code
from your script
Hi,
The output of function mris_anatomical_stats contains the
following measurements: integrated rectified mean curvature, integrated
rectified Gaussian curvature, folding index and intrinsic curvature index. Can
someone please give me a brief explanation of what these measurements are or
Hi,
I am interested in changing the white matter low limit for
the segmentation step. For this I typed the following in the command prompt:
recon-all subjid subjectname -autorecon2
seg-wlo low limit value
this gave me an error stating that it could not recognize
seg-wlo flag. I was
14 matches
Mail list logo