Hi All,
I'm trying to reconstruct surfaces using recon-all. Though many of the
subjects have succeeded, a few are failing at the mri_nu_correct stage. The
error file (posted below) provides little detail as to why the error is
occurring.
Even if it is not fixable, it would be nice to know what
Any other thoughts as to what might be going wrong with our coordinate
transformations / any other transformations that we might not be taking
into account?
Thanks,
Isaac
On Tue, Apr 29, 2014 at 4:52 PM, ISAAC PEDISICH i...@sas.upenn.edu wrote:
The purpose of what I'm trying to do is getting
, ISAAC PEDISICH wrote:
Hi All,
I am attempting to transform sets of coordinates from subject CRS
space into the surfaceRAS space of an average subject, made with
make_average_subject.
By our current method, we register the individual CT to the average
surface using mri_robust_register
, what coordinate system are you trying to go to?
The equation you have below takes CRS in the CT and maps it to tkrRAS in
the anatomical. If you want to map the CRS in the anat then use
inv(Tanat) * inv(Reg_avg) * Tmov * CT_coords
On 04/28/2014 03:58 PM, ISAAC PEDISICH wrote:
Hi Doug,
Thanks
Hi All,
I am attempting to transform sets of coordinates from subject CRS space
into the surfaceRAS space of an average subject, made with
make_average_subject.
By our current method, we register the individual CT to the average surface
using mri_robust_register with the command:
