Re: [Freesurfer] make_average_subject error

  make_average_subject [your arguments] |& tee mas.log On 9/4/2019 9:16 PM, Maxime Perron wrote:     External Email - Use Caution      Good evening Greve,   Thanks for your quick answer.   I attached the file containing the output.   Best, Maxime

Re: [Freesurfer] make_average_subject error

he full text of the terminal output? > > On 9/4/19 10:44 AM, Maxime Perron wrote: >> External Email - Use Caution >> >> Hi Greve, >> >> The exact script is the following : >> >> >> setenv SUBJECTS_DIR >> /Volumes/Groups/t

Re: [Freesurfer] make_average_subject error

urfer_S133" "Freesurfer_S134" "Freesurfer_S139" "Freesurfer_S141" "Freesurfer_S142" "Freesurfer_S144" "Freesurfer_S145" "Freesurfer_S146" "Freesurfer_S147" "Freesurfer_S148" "Freesurfer_S150" "Freesurfer_S151&qu

[Freesurfer] make_average_subject error

External Email - Use Caution ​Dear Freesurfer Experts, I have the following issue when running the make_average_subject command ( make_average_subject --subjects (Subjid) --out BrainaverageN72) :  Building hash of lh white Building hash of lh pial Building hash of r

Re: [Freesurfer] Gray matter segmentation

Objet : Re: [Freesurfer] Gray matter segmentation Can you tar up and upload the subjects to ftp://surfer.nmr.mgh.harvard.edu/transfer/incoming Let me know when they are there On 3/4/19 4:59 PM, Maxime Perron wrote: > > External Email - Use Caution > > Hi Freesurfer Experts,

Re: [Freesurfer] Correction Needed for the Midline

sibly - I would definitely start there. The surfaces are following the corpus callosum into the right hemisphere because the aseg labeling is off. Best, Bram From: freesurfer-boun...@nmr.mgh.harvard.edu on behalf of Maxime Perron Sent: Tuesday, October 16, 2018 2:48:46 PM To: Freesurf

Re: [Freesurfer] Correction Needed for the Midline

Bram From: freesurfer-boun...@nmr.mgh.harvard.edu on behalf of Maxime Perron Sent: Tuesday, October 16, 2018 2:23:22 PM To: Freesurfer support list Subject: Re: [Freesurfer] Correction Needed for the Midline   External Email - Use Caution Sorry. Here are the good

Re: [Freesurfer] Correction Needed for the Midline

External Email - Use Caution Sorry. Here are the good links :  http://gate.nmr.mgh.harvard.edu/filedrop2/?p=1maf5ah0hw0 http://gate.nmr.mgh.harvard.edu/filedrop2/?p=abmzg2jvk9t Maxime  On Oct 16, 2018, at 2:22 PM, Maxime Perron <maxime.perro...@ulaval.ca>

Re: [Freesurfer] Correction Needed for the Midline

Maxime, I'm having trouble finding your data - can you please use the filedrop instead? https://gate.nmr.mgh.harvard.edu/filedrop2/ Thanks, Bram From: freesurfer-boun...@nmr.mgh.harvard.edu <freesurfer-boun...@nmr.mgh.harvard.edu> on behalf of Maxime Perron <maxim

Re: [Freesurfer] Correction Needed for the Midline

ving and get back to you after the weekend. Best, Bram From: freesurfer-boun...@nmr.mgh.harvard.edu on behalf of Maxime Perron Sent: Tuesday, September 25, 2018 1:14:08 PM To: Freesurfer support list Subject: Re: [Freesurfer] Correction Needed for the Midline     

Re: [Freesurfer] Correction Needed for the Midline

, Maxime​ De : freesurfer-boun...@nmr.mgh.harvard.edu de la part de Maxime Perron Envoyé : 17 septembre 2018 10:00 À : Freesurfer support list Objet : Re: [Freesurfer] Midline errors External Email - Use Caution Hi Freesurfer Experts, I was

Re: [Freesurfer] Midline errors

External Email - Use Caution Hi Freesurfer Experts, I was wondering if you have had time to look at my data to correct my midline problems? Many of my subjects have this problem. Best regards, Maxime De : Maxime Perron Envoyé : 13

Re: [Freesurfer] Midline errors

site we > will take a look. Please include voxel coordinates of the spots you think are > inaccurate. > > cheers > Bruce > On Thu, 13 Sep 2018, Maxime Perron wrote: > >> External Email - Use Caution >> >> Hi Freesurfer Experts, >> >> I

Re: [Freesurfer] Midline errors

of left/right ventricle voxels are mislabeled > Bruce > On Fri, 10 Aug 2018, Maxime Perron wrote: > >> External Email - Use Caution >> Hello FreeSurfer Developers, >> >> I use Freesurfer 6 on macOS Sierra 10.12.6. In several subjects, I found >