--surf)
doug
On 05/14/2013 08:00 AM, René Besseling wrote:
Hi Freesurfers,
For this analysis I plan to do, I want to map resting-state data in
native (T1) space to the pial surface. The command I use for this is:
mri_vol2surf --src fMRI_nat.nii --regheader subjID --hemi lh
--projfrac-avg
Hi Freesurfers,
For this analysis I plan to do, I want to map resting-state data in native
(T1) space to the pial surface. The command I use for this is:
mri_vol2surf --src fMRI_nat.nii --regheader subjID --hemi lh --projfrac-avg
0 1 0.05 --surf pial --o fMRI_2surf.mgh
So the intention is to
,
so you can't change the target volume without specifying a different
transform. I'm at a bit of a loss as to why this is not working. What is
your tkmedit command?
doug
On 04/05/2012 06:04 AM, René Besseling wrote:
Hi Doug,
I'm using tksurfer to visualize the surface maps; this looks OK
Dear Freesurfer users,
I've been trying to map a Qdec contrast sig.mgh to the native volume of a
subject using mri_surf2surf (to get from Qdec fsaverage surface to native
surface) and mri_surf2vol (to map from native surface to native volume
cortical ribbon). However, the last step goes wrong: I
Dear all,
A beginners question: what does the sign mean in the multiple
comparison simulations? I thought it defines the side of the t-test
performed on the glm parameter estimates, but since you can run the
simulations for a bunch of contrasts simultaneously and since in some
cases you might be
Dear all,
I'd like to analyse some Freesurfer outputs in Matlab. I know it is
possible to load ./surf/lh.thickness into Matlab using read_curv, but
is it also possible to load normalized (and smoothed) thickness maps,
i.e. thickness maps registered to fsaverage, for vertex-wise
comparison? I
