[Freesurfer] Question regarding Euler number

2020-08-06 Thread Scheffler, F, Mev [fre...@sun.ac.za]
External Email - Use Caution Dear FreeSurfer Devs I got a comment about including a SNR variable in my main stats analysis and so came across a Rosen et al 2018 paper which refers to the Euler number. I then checked the archives and came across a

Re: [Freesurfer] Error in segmentHA_T1.sh

2018-10-26 Thread Scheffler, F, Mev [fre...@sun.ac.za]
21 938 9771 Email | E-pos: fre...@sun.ac.za From: on behalf of "Scheffler, F, Mev [fre...@sun.ac.za]" Reply-To: Freesurfer support list Date: Friday, 26 October 2018 at 18:24 To: Freesurfer support list Subject: [Freesurfer] Error in segmentHA_T1.sh External Email - U

[Freesurfer] Error in segmentHA_T1.sh

2018-10-26 Thread Scheffler, F, Mev [fre...@sun.ac.za]
External Email - Use Caution Dear Freesurfer Developers I’ve run recon-all -all on a batch of 20 subjects on a linux based high performance computing setup and am now trying to run the segmentHA_T1 on them as well. It sets up the environment and then complains about myMRIread

[Freesurfer] Running DICOMS versus FreeSurfer5.3 Output

2018-10-18 Thread Scheffler, F, Mev [fre...@sun.ac.za]
External Email - Use Caution Dear FreeSurfer Developers If we want to rerun FreeSurfer dev 6.1 on an old dataset, is it better to rerun with the original DICOMS or to rerun over the 5.3 output? Would that even work? Thanks very much. Kind regards, FREDA SCHEFFLER Research

Re: [Freesurfer] freesurfer development version for mac incomplete

2018-08-30 Thread Scheffler, F, Mev [fre...@sun.ac.za]
External Email - Use Caution Dear FreeSurfer developers I’m struggling to download the linux development version, could you please send me the link? This mac version you sent to Ani downloaded fine, but I just can’t access the linux version link through the website and we’ve

[Freesurfer] Freesurfer dev version not available on the server

2018-08-06 Thread Scheffler, F, Mev [fre...@sun.ac.za]
External Email - Use Caution Dear Freesurfer Developers I’ve been trying to download the development version but I keep getting an error message. Error: The share does not exist on the server. Please check the share name, and then try again. Any suggestions or alternatives?