Hi Sierra,
the long command should be
recon-all -long C002d C002.base -mprage …..
same way as you called it the first time when using the -all flag.
Best, Martin
> On 8. Jun 2019, at 20:28, Sierra Ann Jarvis wrote:
>
> External Email - Use Caution
>
>
> Hello Freesurfers,
>
> I am trying to apply Pial edits to my longitudinal time point. I have tried
> the command,
>
> recon-all -long C002d.long.C002.base/ C002.base -mprage -3T -norm2-b 20
> -norm2-n 5 -autorecon2 -autorecon3
>
> But receive the error,
>
> Unmatched “.
>
> I am using freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.0-2beb96c
>
> Do you know what could be the reason for this?
> Sierra
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