Re: [Freesurfer] Brodmann area parcellation

2019-10-07 Thread Greve, Douglas N.,Ph.D.
when you look in the label file, do you see lh.BA1_exvivo.label lh.BA2_exvivo.label lh.BA3a_exvivo.label lh.BA3b_exvivo.label lh.BA44_exvivo.label lh.BA45_exvivo.label lh.BA4a_exvivo.label lh.BA4p_exvivo.label lh.BA6_exvivo.label On 10/7/2019 11:50 AM, sang ho shin wrote: External Email

Re: [Freesurfer] Brodmann area parcellation

2019-10-07 Thread sang ho shin
External Email - Use Caution Dear Douglas, Thank you for your reply. I already ran the full recon-all and I got the results(label, mri, scripts, stats, surf, tmp, touch, trash). But though I tried to get the mask of both brodmann area 4 and 6, I couldn't get the masks. (404BA4a,

Re: [Freesurfer] Brodmann area parcellation

2019-10-07 Thread Bruce Fischl
meaning you have to give recon-all the -all switch so it can create things like the lh.white surface cheers Bruce On Mon, 7 Oct 2019, Greve, Douglas N.,Ph.D. wrote: You can to run the full recon-all on a given subject's data, and it will create the broadmann areas On 10/5/2019 1:31 AM,

Re: [Freesurfer] Brodmann area parcellation

2019-10-07 Thread Greve, Douglas N.,Ph.D.
You can to run the full recon-all on a given subject's data, and it will create the broadmann areas On 10/5/2019 1:31 AM, sang ho shin wrote: External Email - Use Caution Dear Freesurfer Developers, I am trying to get the seed mask of premotor and motor cortex. Because I can't get

[Freesurfer] Brodmann area parcellation

2019-10-04 Thread sang ho shin
External Email - Use Caution Dear Freesurfer Developers, I am trying to get the seed mask of premotor and motor cortex. Because I can't get it through 'recon-all -all', I tried to find brodmann area ('recon-all -s subjid -ba-labels') But I received ERROR message. Can you tell me