Re: [Freesurfer] How to compute the measures on the average brain?

Great, thanks for your answer. Le 22/10/2015 17:42, Douglas N Greve a écrit : > No, we will continue to support it > > On 10/21/2015 11:13 PM, Mathieu Dubois wrote: >> Hi again, >> >> Another advantage of using qcache in my case is that the file names are >> automatically generated and therefore

Re: [Freesurfer] How to compute the measures on the average brain?

Great, thanks for your answer. Le 22/10/2015 17:08, Bruce Fischl a écrit : Hi Mathieu I don't see any reason we wouldn't continue to support it Bruce On Thu, 22 Oct 2015, Mathieu Dubois wrote: Hi again, Another advantage of using qcache in my case is that the file names are automatically

Re: [Freesurfer] How to compute the measures on the average brain?

No, we will continue to support it On 10/21/2015 11:13 PM, Mathieu Dubois wrote: > Hi again, > > Another advantage of using qcache in my case is that the file names are > automatically generated and therefore standard. > > Is there any risk (particularly for future compatibility) in using >

Re: [Freesurfer] How to compute the measures on the average brain?

Hi Mathieu I don't see any reason we wouldn't continue to support it Bruce On Thu, 22 Oct 2015, Mathieu Dubois wrote: Hi again, Another advantage of using qcache in my case is that the file names are automatically generated and therefore standard. Is there any risk (particularly for future

Re: [Freesurfer] How to compute the measures on the average brain?

  hello,   please delete mey e-mail from the list!   Thank you   Greets and Bye Bye   Mareen Kussatz ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in

[Freesurfer] How to compute the measures on the average brain?

Hi, I'm a beginner with freesurfer so I apologize if it's a trivial question. I recently run recon-all with the -all on many subjects. As far as I can say, all the steps worked. However, the measures on the average brain (output of mris_preproc and friends) were not computed. A colleague told

Re: [Freesurfer] How to compute the measures on the average brain?

Hello Mareen, You can do that in the "unsubscribe" section on the following page: http://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer Best, -Zeke On 10/21/2015 11:06 AM, Mareen Kussatz wrote: > hello, > please delete mey e-mail from the list! > Thank you > Greets and Bye Bye >

Re: [Freesurfer] How to compute the measures on the average brain?

Hi Doug, Thanks for your answer. If I understand correctly, the tutorial describes the use of mris_preproc with a group description file. If the data has not been cached, it will compute them and stack all the results in a big file (will it write individual files?) . Of course if the data has

Re: [Freesurfer] How to compute the measures on the average brain?

Hi Mareen the link at the end of your email allows you to go to our website and unsubscribe yourself. cheers Bruce On Wed, 21 Oct 2015, Mareen Kussatz wrote:   hello,   please delete mey e-mail from the list!   Thank you   Greets and Bye Bye   Mareen Kussatz

Re: [Freesurfer] How to compute the measures on the average brain?

Hi Mathieu, look at the group analysis tutorial on our wiki. Basically, you will run mris_preproc, mri_surf2surf to smooth, then mri_glmfit to do the group analysis, then mri_glmfit-sim to do the correction for multiple comparisons. doug On 10/21/15 10:15 AM, Mathieu Dubois wrote: > Hi, > >

Re: [Freesurfer] How to compute the measures on the average brain?

Hi again, Another advantage of using qcache in my case is that the file names are automatically generated and therefore standard. Is there any risk (particularly for future compatibility) in using qcache? Did anyone had some problem with it? Thanks in advance, Mathieu Le 21/10/2015 18:07,