Re: [Freesurfer] Libnetcdf.so.6 error during mris_make_surfaces

2017-06-20 Thread Lisa Kramarenko 
Hey,

do you have any idea on what might be causing this error and how to install
this library?

Thanks!
Lisa

On 15 June 2017 at 16:20, Lisa Kramarenko  wrote:

> Hi,
>
> sure, it's
>
> freesurfer-Linux-centos6_x86_64-stable-pub-v5.3.0-HCP
>
> thanks!
>
> On 13 June 2017 at 19:38, Z K  wrote:
>
>> Hello Lisa,
>>
>> Can you provide me with the contents of your
>> FREESURFER_HOME/build-stamp.txt file
>>
>> On 06/12/2017 05:44 PM, Lisa Kramarenko wrote:
>> > Hi,
>> >
>> > I am getting the following error when my HCP pipelines come to the
>> > mris_make surfaces step:
>> >
>> > mris_make_surfaces: error while loading shared libraries:
>> > libnetcdf.so.6: cannot open shared object file: No such file or
>> directory
>> >
>> > I saw this response:
>> > https://www.mail-archive.com/hcp-users@humanconnectome.org/m
>> sg02418.html
>> > but the files are not available anymore and I cannot find where to
>> > download it. I have Ubuntu 14.04 (64-bit). Do you have any idea about
>> > what causes this problem and how to solve it?
>> >
>> > Thanks a lot!
>> > Lisa
>> >
>> >
>> > ___
>> > Freesurfer mailing list
>> > Freesurfer@nmr.mgh.harvard.edu
>> > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
>> >
>> ___
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>>
>>
>> The information in this e-mail is intended only for the person to whom it
>> is
>> addressed. If you believe this e-mail was sent to you in error and the
>> e-mail
>> contains patient information, please contact the Partners Compliance
>> HelpLine at
>> http://www.partners.org/complianceline . If the e-mail was sent to you
>> in error
>> but does not contain patient information, please contact the sender and
>> properly
>> dispose of the e-mail.
>>
>>
>
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Re: [Freesurfer] Libnetcdf.so.6 error during mris_make_surfaces

2017-06-15 Thread Lisa Kramarenko 
Hi,

sure, it's

freesurfer-Linux-centos6_x86_64-stable-pub-v5.3.0-HCP

thanks!

On 13 June 2017 at 19:38, Z K  wrote:

> Hello Lisa,
>
> Can you provide me with the contents of your
> FREESURFER_HOME/build-stamp.txt file
>
> On 06/12/2017 05:44 PM, Lisa Kramarenko wrote:
> > Hi,
> >
> > I am getting the following error when my HCP pipelines come to the
> > mris_make surfaces step:
> >
> > mris_make_surfaces: error while loading shared libraries:
> > libnetcdf.so.6: cannot open shared object file: No such file or directory
> >
> > I saw this response:
> > https://www.mail-archive.com/hcp-users@humanconnectome.org/msg02418.html
> > but the files are not available anymore and I cannot find where to
> > download it. I have Ubuntu 14.04 (64-bit). Do you have any idea about
> > what causes this problem and how to solve it?
> >
> > Thanks a lot!
> > Lisa
> >
> >
> > ___
> > Freesurfer mailing list
> > Freesurfer@nmr.mgh.harvard.edu
> > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
> >
> ___
> Freesurfer mailing list
> Freesurfer@nmr.mgh.harvard.edu
> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
>
>
> The information in this e-mail is intended only for the person to whom it
> is
> addressed. If you believe this e-mail was sent to you in error and the
> e-mail
> contains patient information, please contact the Partners Compliance
> HelpLine at
> http://www.partners.org/complianceline . If the e-mail was sent to you in
> error
> but does not contain patient information, please contact the sender and
> properly
> dispose of the e-mail.
>
>
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The information in this e-mail is intended only for the person to whom it is
addressed. If you believe this e-mail was sent to you in error and the e-mail
contains patient information, please contact the Partners Compliance HelpLine at
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Re: [Freesurfer] Libnetcdf.so.6 error during mris_make_surfaces

2017-06-13 Thread Z K 
Hello Lisa,

Can you provide me with the contents of your 
FREESURFER_HOME/build-stamp.txt file

On 06/12/2017 05:44 PM, Lisa Kramarenko wrote:
> Hi,
> 
> I am getting the following error when my HCP pipelines come to the 
> mris_make surfaces step:
> 
> mris_make_surfaces: error while loading shared libraries: 
> libnetcdf.so.6: cannot open shared object file: No such file or directory
> 
> I saw this response: 
> https://www.mail-archive.com/hcp-users@humanconnectome.org/msg02418.html 
> but the files are not available anymore and I cannot find where to 
> download it. I have Ubuntu 14.04 (64-bit). Do you have any idea about 
> what causes this problem and how to solve it?
> 
> Thanks a lot!
> Lisa
> 
> 
> ___
> Freesurfer mailing list
> Freesurfer@nmr.mgh.harvard.edu
> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
> 
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addressed. If you believe this e-mail was sent to you in error and the e-mail
contains patient information, please contact the Partners Compliance HelpLine at
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dispose of the e-mail.

[Freesurfer] Libnetcdf.so.6 error during mris_make_surfaces

2017-06-12 Thread Lisa Kramarenko 
Hi,

I am getting the following error when my HCP pipelines come to the
mris_make surfaces step:

mris_make_surfaces: error while loading shared libraries: libnetcdf.so.6:
cannot open shared object file: No such file or directory

I saw this response:
https://www.mail-archive.com/hcp-users@humanconnectome.org/msg02418.html
but the files are not available anymore and I cannot find where to download
it. I have Ubuntu 14.04 (64-bit). Do you have any idea about what causes
this problem and how to solve it?

Thanks a lot!
Lisa
___
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The information in this e-mail is intended only for the person to whom it is
addressed. If you believe this e-mail was sent to you in error and the e-mail
contains patient information, please contact the Partners Compliance HelpLine at
http://www.partners.org/complianceline . If the e-mail was sent to you in error
but does not contain patient information, please contact the sender and properly
dispose of the e-mail.