Have you verified that the Anat-Func registration in FreeSurfer is
correct? You can view it with tkregister-sess.
On 06/16/2016 10:26 AM, Martin Juneja wrote:
> Hi Dr. Greve,
>
> I used following command for this:
>
> mkanalysis-sess -analysis LH_XY.surf.lh
> -surface fsaverage lh -fwhm 5
Hi Dr. Greve,
I used following command for this:
mkanalysis-sess -analysis LH_XY.surf.lh
-surface fsaverage lh -fwhm 5 -notask -taskreg LH_XYZ.dat 1 -nuisreg
vcsf.dat 5 -nuisreg wm.dat 5 -mcextreg -polyfit 5 -nskip 4 -fsd bold
-TR
3.
Thanks.
On Wed, Jun 15, 2016 at 3:07 PM, Douglas N Greve
what was your mkanalysis-sess command?
On 06/08/2016 02:10 PM, Martin Juneja wrote:
> Dear FreeSurfer and SPM experts,
>
> I am trying to calculate functional connectivity maps using FreeSurfer
> pipeline:
> http://surfer.nmr.mgh.harvard.edu/fswiki/FsFastFunctionalConnectivityWalkthrough.
>
>
