Hi all,
I am trying to find the sub directory in the Freesurfer directory which
contains all the atlases like MNI, JHU, etc. Can you please help me out...
Thanks,
Regards,
Sameer Kumar Gottipati
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Sameer,
The freesurfer atlases are found in the $FREESURFER_HOME/average
directory. The .gcs files are the surface atlases and the .gca files
are the subcortical atlases. These are used by the recon-all script.
I'm not sure what you mean by MNI and JHU atlases. The other files in
the average
