] T2pial/FLAIRpial
processing issues
Hi Matt, Bruce,
The problems are indeed a flirt issue, but given
that it's
programmed
with
--init-fsl there is not much flexibility
...@nmr.mgh.harvard.edu
Cc: Veronica Popescu v.pope...@vumc.nl, Hugo Vrenken
h.vren...@vumc.nl,
freesurfer freesurfer@nmr.mgh.harvard.edu
Subject: Re: [Freesurfer] T2pial/FLAIRpial processing issues
Hi Matt, Bruce,
The problems are indeed a flirt issue, but given that it's programmed
,
freesurfer freesurfer@nmr.mgh.harvard.edu
Subject: Re: [Freesurfer] T2pial/FLAIRpial processing issues
Hi Matt, Bruce,
The problems are indeed a flirt issue, but given that it's programmed
with
--init-fsl there is not much flexibility.
However, from a FS point of view, it might
@nmr.mgh.harvard.edu
Subject: Re: [Freesurfer] T2pial/FLAIRpial processing issues
Hi Matt, Bruce,
The problems are indeed a flirt issue, but given that it's
programmed
with
--init-fsl there is not much flexibility
/FLAIRpial processing issues
Hi Matt, Bruce,
The problems are indeed a flirt issue, but given that it's
programmed
with
--init-fsl there is not much flexibility.
However, from a FS point of view, it might be a better
: [Freesurfer] T2pial/FLAIRpial
processing issues
Hi Matt, Bruce,
The problems are indeed a flirt issue, but given
that it's
programmed
with
--init-fsl there is not much flexibility
Popescu v.pope...@vumc.nl, Hugo Vrenken h.vren...@vumc.nl
Subject: [Freesurfer] T2pial/FLAIRpial processing issues
Dear all,
There seem to be some serious issues with the T2pial / FLAIRpial processing
options provided in the latest versions of FreeSurfer.
First of all, although not clearly
Hi Martijn
we can print warning and errors if FSLDIR is not set, but the registration
errros seem to be mostly a flirt issue, no? Have you posted on the FSL
list?
Bruce
On Thu, 14 Nov 2013,
Martijn Steenwijk wrote:
Dear all,
There seem to be some serious issues with the T2pial /
Hi Matt, Bruce,
The problems are indeed a flirt issue, but given that it's programmed with
--init-fsl there is not much flexibility.
However, from a FS point of view, it might be a better and more robust
approach to first register FLAIRraw.mgz to raw.mgz, and then concatenate
the resulting
Steenwijk martijnsteenw...@gmail.com
Date: Thursday, November 14, 2013 9:27 AM
To: Bruce Fischl fis...@nmr.mgh.harvard.edu
Cc: Veronica Popescu v.pope...@vumc.nl, Hugo Vrenken h.vren...@vumc.nl,
freesurfer freesurfer@nmr.mgh.harvard.edu
Subject: Re: [Freesurfer] T2pial/FLAIRpial processing issues
Hi
AM
To: Bruce Fischl fis...@nmr.mgh.harvard.edu
Cc: Veronica Popescu v.pope...@vumc.nl, Hugo Vrenken h.vren...@vumc.nl,
freesurfer freesurfer@nmr.mgh.harvard.edu
Subject: Re: [Freesurfer] T2pial/FLAIRpial processing issues
Hi Matt, Bruce,
The problems are indeed a flirt issue, but given that it's
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