Hi Vincent - Thanks for bringing this to my attention. I can see what
might cause this glitch (only in the longitudinal case) and I'll fix it in
the next version.
In the meantime, if you delete one of the two identical lines from
cpts.map.txt, and then rerun the dmri_pathstats command line
Hi Vincent - If you upload the tracula dirs for this particular time
point, I'll take a look.
a.y
On Mon, 20 May 2013, Vincent Brunsch wrote:
Hi Anastasia,
Thanks for your help! I had this issue with 4 tracts in total. I just want to
add that before rerunning dmri_pathstats not only
Hi Anastasia,
the files are here:
/autofs/cluster/lazar/projects/Templeton/dng/dtionly/Tracula/tracall/TC055FB.v2/dpathlong/lh.cst_AS_avg33_mni_bbr
The base is here:
/autofs/cluster/lazar/projects/Templeton/dng/dtionly/Tracula/tracall/longbaseTC055FB
Freesurfer outputs:
Dear Anastasia,
When running the longitudinal tracula version on our 39 subjects I found
for some of them nan-values for the center_avg variables of some tracts.
When I have a look at the tract distribution and the highest probability
path, everything seems to be ok. However, when checking the
