Re: [Freesurfer] What does trac-all do on the file 'bvecs'?

2012-02-07 Thread Anastasia Yendiki
    发件人: ayendiki 发送时间: 2012-02-04  15:22:09 收件人: Xiangzhen Kong 抄送: freesurfer 主题: Re: [Freesurfer] What does trac-all do on the file 'bvecs'? You don't have to multiply the bvecs with anything yourself, it will do it for you. Of course you should check that it does it correctly

[Freesurfer] What does trac-all do on the file 'bvecs'?

2012-02-03 Thread Xiangzhen Kong
Hi, all~ I use trac-all with .nii data, not dicom. So I have to specify the bvecs and bvals in the config file. Trac-all requires a bvecs file in 3 columes, but FSL need that in 3 raws. I wonder what does trac-all do on the bvecs file that I specify. And I have check the code 'trac-preproc' and

Re: [Freesurfer] What does trac-all do on the file 'bvecs'?

2012-02-03 Thread Anastasia Yendiki
When the DWIs are transformed to LAS and processed with eddy_correct, the same transformations are applied to the respective bvecs. On Fri, 3 Feb 2012, Xiangzhen Kong wrote: Hi, all~   I use trac-all with .nii data, not dicom. So I have to specify the bvecs and bvals in the config file.

Re: [Freesurfer] What does trac-all do on the file 'bvecs'?

2012-02-03 Thread Xiangzhen Kong
间: 2012-02-04 00:48:58 收件人: Xiangzhen Kong 抄送: freesurfer 主题: Re: [Freesurfer] What does trac-all do on the file 'bvecs'? When the DWIs are transformed to LAS and processed with eddy_correct, the same transformations are applied to the respective bvecs. On Fri, 3 Feb 2012, Xiangzhen Kong wrote

Re: [Freesurfer] What does trac-all do on the file 'bvecs'?

2012-02-03 Thread ayendiki
: [Freesurfer] What does trac-all do on the file 'bvecs'? When the DWIs are transformed to LAS and processed with eddy_correct, the same transformations are applied to the respective bvecs. On Fri, 3 Feb 2012, Xiangzhen Kong wrote: Hi, all~ ? I use trac-all with .nii data, not dicom. So I have