, 2017 at 12:56 PM
To: Freesurfer support list <freesurfer@nmr.mgh.harvard.edu>
Subject: Re: [Freesurfer] bbregister error -- Human Connectome Project Data
Okay so if I am going to try and run this option, recon-all must also be
done on the structural scans. I have the pre-processed structural
Freesurfer support list <freesurfer@nmr.mgh.harvard.edu>
> Date: Wednesday, December 27, 2017 at 5:55 PM
> To: Freesurfer support list <freesurfer@nmr.mgh.harvard.edu>
>
> Subject: Re: [Freesurfer] bbregister error -- Human Connectome Project
> Data
>
> Matt,
>
r@nmr.mgh.harvard.edu>
Subject: Re: [Freesurfer] bbregister error -- Human Connectome Project Data
Matt,
Thanks for the quick reply! I'll check out that Wiki document and the 2016
Nature paper first.
The reason I have the pre-processed (but not ICA-FIX'ed) rfMRI data is
because I would like to use th
surfer@nmr.mgh.harvard.edu>
> Date: Wednesday, December 27, 2017 at 4:41 PM
> To: <freesurfer@nmr.mgh.harvard.edu>
> Subject: Re: [Freesurfer] bbregister error -- Human Connectome Project
> Data
>
> As a work-around to the above issue, I did the registrations directly in
> FSL using F
oun...@nmr.mgh.harvard.edu> on behalf of Lana Ruck
<lr...@umail.iu.edu>
Reply-To: Freesurfer support list <freesurfer@nmr.mgh.harvard.edu>
Date: Wednesday, December 27, 2017 at 4:41 PM
To: <freesurfer@nmr.mgh.harvard.edu>
Subject: Re: [Freesurfer] bbregister error -- Human Connectome Projec
As a work-around to the above issue, I did the registrations directly in
FSL using FLIRT, and then converted the resultant fsl reg.mat files to
freesurfer reg.dat files (using tkregister2; they all look fine). Now, all
I need is to project these rfMRI data to fsaverage4, and I thought
mri_vol2surf
Hello,
I am currently starting a project with the minimally pre-processed rfMRI
from the Human Connectome Project, but I need to do some additional
processing first. This includes smoothing at 6mm FWHM and projection onto
the fsaverage4 surface. I have smoothed the pre-processed rfMRI data using
