[Freesurfer] missing DOSS option in QDEC

2013-05-21 Thread Andreas Berger
Hi surfers, as of FreeSurfer version 5.3, i am missing the option to choose between DOSS and DODS design in QDEC. The radiobuttons in the design tab are no longer there. The default behaviour, judging from the results, seems to be DODS. Has this option been removed? regards, Andreas

Re: [Freesurfer] missing DOSS option in QDEC

2013-05-21 Thread Nick Schmansky
Andreas, DOSS was removed from qdec because the contrast generation code in qdec was not appropriate for it (and we didnt have time to add it). You will have to use the command-line mri_glmfit and create your own contrasts to use DOSS. There are examples on the wiki i think. Nick Hi