Re: [Freesurfer] mri_synthsr with CT images

2023-03-20 Thread Iglesias Gonzalez, Juan E.
Dear Gonzalo, It normally mean “you ran out of memory”. Does cropping the input image a bit more tightly around the brain solve the problem? (you can easily use Freeview->tools for this) Cheers, /E -- Juan Eugenio Iglesias http://www.jeiglesias.com From: Gonzalo Rojas Costa Date: Friday,

[Freesurfer] mri_synthsr with CT images

2023-03-17 Thread Gonzalo Rojas Costa
External Email - Use Caution Dear Juan: I tested mri_synthsr using three different CT images with the threshold (80 value) that you told me some days ago. The first works ok, but with the other 2, I got the following error: developer@developer-VirtualBox:~$ mri_synthseg --i