boun...@nmr.mgh.harvard.edu>
on behalf of Douglas N. Greve
<mailto:dgr...@mgh.harvard.edu>
Sent: Wednesday, September 9, 2020 6:23 PM
To: freesurfer@nmr.mgh.harvard.edu<mailto:freesurfer@nmr.mgh.harvard.edu>
<mailto:freesurfer@nmr.mgh.harvard.edu>
Subject: Re: [Freesur
u>
on behalf of Douglas N. Greve
<mailto:dgr...@mgh.harvard.edu>
Sent: Wednesday, September 9, 2020 6:23 PM
To: freesurfer@nmr.mgh.harvard.edu<mailto:freesurfer@nmr.mgh.harvard.edu>
<mailto:freesurfer@nmr.mgh.harvard.edu>
Subject: Re: [Freesurfer] mri_volsynth question
Load $SUBJECTS_
Sent:*Wednesday, September 9, 2020 6:23 PM
*To:*freesurfer@nmr.mgh.harvard.edu
*Subject:*Re: [Freesurfer] mri_volsynth question
Load $SUBJECTS_DIR/fsaverage/mri/brainmask.mgz into freeview and
find the voxel where you want it to be centered. Then run
mri_volsynth as you have below but add --del
9, 2020 6:23 PM
To: freesurfer@nmr.mgh.harvard.edu<mailto:freesurfer@nmr.mgh.harvard.edu>
<mailto:freesurfer@nmr.mgh.harvard.edu>
Subject: Re: [Freesurfer] mri_volsynth question
Load $SUBJECTS_DIR/fsaverage/mri/brainmask.mgz into freeview and find the voxel
where you want it to be centered. Then
glas N. Greve
*Sent:*Wednesday, September 9, 2020 6:23 PM
*To:*freesurfer@nmr.mgh.harvard.edu
*Subject:*Re: [Freesurfer] mri_volsynth question
Load $SUBJECTS_DIR/fsaverage/mri/brainmask.mgz into freeview and
find the voxel where you want it to be centered. Then run
mri_volsynth as you have below b
, September 9, 2020 6:23 PM
To: freesurfer@nmr.mgh.harvard.edu<mailto:freesurfer@nmr.mgh.harvard.edu>
<mailto:freesurfer@nmr.mgh.harvard.edu>
Subject: Re: [Freesurfer] mri_volsynth question
Load $SUBJECTS_DIR/fsaverage/mri/brainmask.mgz into freeview and find the voxel
where
, 02129
*From:* freesurfer-boun...@nmr.mgh.harvard.edu
on behalf of Douglas N. Greve
*Sent:* Wednesday, September 9, 2020 6:23 PM
*To:* freesurfer@nmr.mgh.harvard.edu
*Subject:* Re: [Freesurfer] mri_volsynth question
Load
of Douglas N. Greve
Sent: Wednesday, September 9, 2020 6:23 PM
To: freesurfer@nmr.mgh.harvard.edu
Subject: Re: [Freesurfer] mri_volsynth question
Load $SUBJECTS_DIR/fsaverage/mri/brainmask.mgz into freeview and find the voxel
where you want it to be centered. Then run
mri_volsynth as you have
Load $SUBJECTS_DIR/fsaverage/mri/brainmask.mgz into freeview and find
the voxel where you want it to be centered. Then run
mri_volsynth as you have below but add --delta-crsf C R S 0
where C, R, S are the col, row, slice from the voxel you found in freeview
On 9/9/2020 5:39 PM, Nasiriavanaki,
Hi
I am trying to make a subcortical 5 mm sphere ROI around a talairach
coordinate. I am using the below command, but when I visualize it, it doesn’t
look at the correct location. I see the same question in forum
(https://www.mail-archive.com/freesurfer@nmr.mgh.harvard.edu/msg67295.html), I
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