Re: [Freesurfer] question mris_preproc

2013-02-25 Thread Douglas N Greve
If there are negative values in the lh.area, then something is very wrong. Can you double check? If they persist, can you upload the subject? doug On 02/20/2013 10:18 AM, j janssen wrote: Hi, freesurfer-x86_64-redhat-linux-gnu-stable5-20110522 $Id: mris_preproc,v 1.66 2012/12/06 16:06:17

[Freesurfer] question mris_preproc

2013-02-20 Thread j janssen
Hi, freesurfer-x86_64-redhat-linux-gnu-stable5-20110522 $Id: mris_preproc,v 1.66 2012/12/06 16:06:17 mreuter Exp $ after recon-all i ran recon-all -s $subject -qcache this generates lh.area.fsaverage.mgh which only contains values 0 and higher while negative values exist for the lh.area of the