Hi David
it works fine for me. The infinte loop happened when the brainmask was
completely empty I believe, although we fixed it in any case. Can you check
the brainmask? I can also send you an updated mri_cc if you want
cheers
Bruce
On Mon, 12 Oct
2015, Slater David wrote:
Hi Bruce,
Dear Freesurfer experts,
I am running autorecon2 using Freesurfer verion 5.1.0 on Linux. For some
subjects, it looks that the pipeline stucked in the middle of mri_cc and
keeps running for days (without any error message). Last time when it
occurred I thought it may be caused by some
To: freesurfer@nmr.mgh.harvard.edu
Subject: [Freesurfer] unusually long running time in autorecon2
Dear Freesurfer experts,
I am running autorecon2 using Freesurfer verion 5.1.0 on Linux. For some
subjects, it looks that the pipeline stucked in the middle of mri_cc and
keeps running for days (without
and
nonlinear registration worked correctly.
Peace,
Matt.
From: Dawei Liu ldw70...@gmail.com
Date: Wednesday, February 20, 2013 10:49 AM
To: freesurfer@nmr.mgh.harvard.edu
Subject: [Freesurfer] unusually long running time in autorecon2
Dear Freesurfer experts,
I am running
