Re: [Freesurfer] "A question about mris_divide_parcellation"

2018-07-29 Thread Bruce Fischl
I see. Well, given that the original parcels aren't equal in size (they are gyri) the final ones will not be either. Each subdivision within a parcel will be approximately equal in size to the other subdivisions within that same parcel though cheers Bruce On Sun, 29 Jul 2018, Maedeh Khalilian

[Freesurfer] hippocampal subfields segmentation error

2018-07-29 Thread 오진영
External Email - Use Caution Hello, freesurfer experts I'm trying to run segmentation of hippocampal subfields and nuclei of amygdala by using "segmentSF_T1.sh" command. I have downloaded the newest development version(freesurfer v.6.0) and license, as well as the required matlab

[Freesurfer] masking cortical thickness

2018-07-29 Thread N Saf
External Email - Use Caution Dear Freesurfer Experts, I wonder how can I show the cortical thickness surface on just one region of my interest in Freeview. assume that I want to see the thickness surface of one of the regions in DKTatlas. does it work if I make a binary mask of