[Freesurfer] optseq2 downloading pb

2016-09-18 Thread Alexandre Obert
Dear all, I would like to download optseq2 from https://surfer.nmr.mgh.harvard.edu/optseq/ it remains unavailable for several days. Is there any other way to obtain it ? Regards, Alexandre Obert -- Alexandre OBERT Doctorant en Psychologie Cognitive Université de Reims Champagne-Ardenne

[Freesurfer] optseq help

2016-09-27 Thread Alexandre Obert
Dear all, I would like to optimize my design by inserting null-events between my trials (in order to better catch the HRF shape with reasonable duration of the experiment) using optseq. I'm not very familiar with this useful tool and I wonder if you could check my setup? Here my design : I've

[Freesurfer] freesurfer errors-windows bash

2017-10-26 Thread Alexandre Obert
Dear all, I'm would like to run a hippocampal segmentation on my data. However, I'm a beginner with freesurfer thus, I juste try to run the commands with subject training data. I first try to run commands following the recent development (

Re: [Freesurfer] freesurfer errors-windows bash

2017-10-26 Thread Alexandre Obert
. Regards, Alexandre 2017-10-26 17:08 GMT+02:00 Alexandre Obert <obert.alexan...@gmail.com>: > Dear all, > > I'm would like to run a hippocampal segmentation on my data. > However, I'm a beginner with freesurfer thus, I juste try to run the > commands with subject trainin

[Freesurfer] SLURM - speed processing

2018-04-19 Thread Alexandre Obert
External Email - Use Caution Hi all, I'm definitively a noob with both freesurfer and SLURM processes and I wonder if anyone could give me some advice. I tried processing a subject (including hippocampal segmentation) using the following command (freesurfer 6.0.0): recon-all

[Freesurfer] SLURM - speed processing

2018-04-20 Thread Alexandre Obert
; Date: Fri, 20 Apr 2018 09:19:12 + > From: "Backhausen, Lea" <lea.backhau...@uniklinikum-dresden.de> > Subject: Re: [Freesurfer] SLURM - speed processing (Alexandre Obert) > To: "'freesurfer@nmr.mgh.harvard.edu'" > &