[Freesurfer] tksurkfer save error

2018-04-12 Thread Evans, Jennifer (NIH/NIMH) [F]
Hi, This is a repost as I didn’t get a reply to the one I sent a few weeks ago. This error basically means I can’t automatically generate a webpage of all of the segmentation results. I getting an error when trying to save a tiff file using tksurfer on a linux machine via NoMachine

[Freesurfer] tksurkfer save error

2018-04-12 Thread Evans, Jennifer (NIH/NIMH) [F]
lly supporting tksurfer anymore. You can use freeview to save a png from the GUI. Ruopeng, is there a way to take a snap shot from the command line? On 04/12/2018 10:29 AM, Evans, Jennifer (NIH/NIMH) [F] wrote: Hi, This is a repost as I didn?t get a reply to the one I sent a few weeks ago.? This

[Freesurfer] Error saving a tiff file using tksurfer with NoMachine

2018-03-26 Thread Evans, Jennifer (NIH/NIMH) [F]
Hi, I’m getting an error when trying to save a tiff file using tksurfer using NoMachine v5.0.47. I’m running the ENIGMA QA pipeline which has a call similar to: tkfsurfer bert lh inflated. Then, trying to save the tiff either from the GUI or using their script doesn’t work and causes the