[Freesurfer] ASL processing in Freesurfer?

Hi Freesurfer Team, Is there an ASL-friendly processing pipeline embedded in Freesurfer? Something like an equivalent to that of PetSurfer? Thanks. Best Wishes, Elijah Sent from my iPad ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu

[Freesurfer] PCA on PET / Thickness in Freesurfer

Hi Freesurfer Team, For a given group, I want to look at the covariance patterns between thickness and PET. Within Freesurfer, what are some general workflow tips on how I could go about performing PCA (within modality) or joint ICA analyses looking at the covariance patterns across

Re: [Freesurfer] PCA on PET / Thickness in Freesurfer

Thanks Doug. Does that mean that a one group design? With a contrast of 1 0 (adjusting for one variable)? ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this

Re: [Freesurfer] PCA on PET / Thickness in Freesurfer

, you can add --pca to mri_glmfit (run it with --help to get more info). We do not have ICA tools in FS. On 12/01/2016 02:04 PM, Foo Keat Mak wrote: > Hi Freesurfer Team, > > For a given group, I want to look at the covariance patterns between > thickness and PET. Within Freesurfer, w