[Freesurfer] Freesurfer compliant pediatric brain template for pediatric brain segmentation using reconall

2016-09-29 Thread GAJENDRA KATUWAL (RIT Student)
Hello FreeSurfer experts, I am considering using Freesurfer recon-all for segmentation of T1 brain MRIs of young subjects (1-4 years). I am planning to use a Freesurfer compliant pediatric template to maximize the segmentation accuracy. In the publication titled *A FreeSurfer-compliant

[Freesurfer] Freesurfer compliant pediatric brain template for pediatric brain segmentation using reconall

2016-09-28 Thread GAJENDRA KATUWAL (RIT Student)
Hello FreeSurfers, I am considering using Freesurfer recon-all for segmentation of T1 brain MRIs of young subjects (1-4 years). I am planning to use a Freesurfer compliant pediatric template to maximize the segmentation accuracy. In the publication titled *A FreeSurfer-compliant consistent

Re: [Freesurfer] Freesurfer compliant pediatric brain template for pediatric brain segmentation using reconall

2016-09-30 Thread GAJENDRA KATUWAL (RIT Student)
:59 AM, Lilla Zollei <lzol...@nmr.mgh.harvard.edu> wrote: > > Hi Gajendra, > > The recon stream exists in a beta version and will not make it to 6.0. I > am hoping to release the stream and the atlas though before the end of the > year. > > Lilla > > > On

Re: [Freesurfer] FreeSurfer Atlas

2016-10-13 Thread GAJENDRA KATUWAL (RIT Student)
According to this website https://surfer.nmr.mgh.harvard.edu/fswiki/FreeSurferVersion3, Freesurfer v 3.0 uses Aseg atlas for the segmentation of subcortical structures. It does not explicitly mention anything about Freesurfer v5.3 though. On Thu, Oct 13, 2016 at 8:02 AM, AKUDJEDU, THEOPHILUS <