Re: [Freesurfer] Cluster-Defining Threshold of p=0.025

2017-09-13 Thread Jahn, Andrew
--perm-resid This uses the ter Braak method. Run mri_glmfit-sim --help to get more info On 09/07/2017 11:05 AM, Jahn, Andrew wrote: > Hello, > > Is it possible to use cluster-defining thresholds such as p = 0.025 > with mri_glmfit-sim? (This would roughly correspond to a negative

[Freesurfer] Cluster-Defining Threshold of p=0.025

2017-09-07 Thread Jahn, Andrew
Hello, Is it possible to use cluster-defining thresholds such as p = 0.025 with mri_glmfit-sim? (This would roughly correspond to a negative log value of 1.6.) My design doesn't allow the use of permutations for simulating cluster sizes, so I have to use the mczsim option; however, from what I