[Freesurfer] mris_fill on HCP data

Hi all, I have been trying to use the mris_fill function on some Human connectome project data. I firstly convert the .gii file containing the pial surface using mris_convert. When visualising the converted mesh into FreeView everything looks normal. After the first step (“mris_fill -c -r 1”),

Re: [Freesurfer] mris_fill on HCP data

t way? Cheers, Matteo > On 8 Jul 2015, at 16:52, Bruce Fischl wrote: > > Hi Matteo > > what happens if you use our surface format? Does it work properly? > Bruce > > On Wed, 8 Jul 2015, Matteo Bastiani wrote: > >> Hi all, >> >> I have been t

Re: [Freesurfer] mris_fill on HCP data

Nope. > On 8 Jul 2015, at 17:06, Bruce Fischl wrote: > > do you have access to the surfaces before they were converted to gii? > > On Wed, 8 Jul 2015, Matteo Bastiani wrote: > >> Hi Bruce, >> >> yes. With both surfaces (the original hcp '*.pial

[Freesurfer] Doctoral Position in Brain Microstructure Imaging Analysis using MRI and light sheet microscopy

Applications are invited for an MRC fully funded 3.5 year PhD studentship at the University of Nottingham – UK, under the primary supervision of Dr Matteo Bastiani. The successful candidate will engage in specialist training with ex vivo and in vivo (subject to the experience and wishes of the