Re: [Freesurfer] Gcuts erasing voxels within the ventricles

2017-08-09 Thread Bruce Fischl

Hi Elijah

gcuts is a contributed tool (from Mike Chee's lab) and not one that we 
wrote, so I don't think we can help.


sorry
Bruce
On Wed, 9 Aug 2017, 
Elijah Mak wrote:



Hi Freesurfer Team,

I am using gcut to improve the skull stripping on some subjects. I noticed
that it is also removing some of the voxels in the ventricles of the
brainmask.mgz (picture attached). Is this normal behaviour? 

Thanks for your time.

Best Wishes,
Elijah 



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[Freesurfer] Gcuts erasing voxels within the ventricles

2017-08-09 Thread Elijah Mak
Hi Freesurfer Team,

I am using gcut to improve the skull stripping on some subjects. I noticed that 
it is also removing some of the voxels in the ventricles of the brainmask.mgz 
(picture attached). Is this normal behaviour? 

Thanks for your time.

Best Wishes,
Elijah 


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The information in this e-mail is intended only for the person to whom it is
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contains patient information, please contact the Partners Compliance HelpLine at
http://www.partners.org/complianceline . If the e-mail was sent to you in error
but does not contain patient information, please contact the sender and properly
dispose of the e-mail.