Note that you should not use the development version for final analysis.
It should be treated as an alpha version. Any data you analyze will need
to be reanalyzed with a fully released version
On 09/21/2016 12:36 PM, Z K wrote:
> Hello Saeed,
>
> The MNI tools shipped with freesurfer 5.3 are no
Hello Saeed,
The MNI tools shipped with freesurfer 5.3 are not compatible with the
newer versions of perl being shipped on all the newer linux distros.
This has been fixed in our development version and in the upcoming
freesurfer 6 release.
So to get around this issue you will need to download
Hello Douglas,
Any chance to look into this issue?
On Tue, Sep 6, 2016 at 6:26 PM, Saeed Bakhshmand
wrote:
> Sure:
>
> /usr/local/freesurfer/subjects/bert/mri
> /usr/local/freesurfer/bin/mri_nu_correct.mni
> --n 1 --proto-iters 1000 --distance 50 --no-rescale --i orig.mgz --o
> orig_nu.mgz
> nI
Sure:
/usr/local/freesurfer/subjects/bert/mri
/usr/local/freesurfer/bin/mri_nu_correct.mni
--n 1 --proto-iters 1000 --distance 50 --no-rescale --i orig.mgz --o
orig_nu.mgz
nIters 1
$Id: mri_nu_correct.mni,v 1.18.2.1 2013/01/09 21:23:42 nicks Exp $
Linux saeed-CDS-Custom-Configuration 4.4.0-36-gene
I think it is probably an MNI problem. Can you run the following command
and send the terminal output?
mri_nu_correct.mni --n 1 --proto-iters 1000 --distance 50 --no-rescale --i
orig.mgz --o orig_nu.mgz
On 09/04/2016 06:13 PM, Saeed mahdizadeh bakhshmand wrote:
> Hello FreeSurfer Developers,
>
