*Date: *Wednesday, June 8, 2022 at 11:15 AM
*To: *freesurfer@nmr.mgh.harvard.edu
*Subject: *Re: [Freesurfer] Freeview GUI overlay and registration
You will need an lta file that maps from the anatomical to the fmri.
You can get this with something
bbregister --mov template.nii.gz --s subject --t2
You will need an lta file that maps from the anatomical to the fmri. You
can get this with something
bbregister --mov template.nii.gz --s subject --t2 --reg reg.lta
where template.nii.gz is the fmri motion correction template or the mean
fmri (I forgot what it is called in FSL)
On 6/3/2022
