Great!
Thanks so much!
Mona
Zahra (Mona) Nasiriavanaki, M.D.
Postdoctoral Research Fellow
Department of Psychiatry | MGH/HMS
149 13th Street, 149-2615
Boston, MA, USA, 02129
On Jul 22, 2021, at 4:54 PM, Wang, Ruopeng
mailto:rwa...@mgh.harvard.edu>> wrote:
Hi Mona,
The neg.label file has all
Hi Mona,
The neg.label file has all negative scalar values in it, where the default
threshold for the label is set to 0. If you set the threshold to a big negative
number it will show up.
Best,
Ruopeng
On Jul 22, 2021, at 3:35 PM, Nasiriavanaki, Zahra,M.D.
yes, that is correct
On 12/4/2019 5:30 AM, Ferraro, Pilar wrote:
> External Email - Use Caution
>
> Yes, absolutely, this should work! Many Thanks!
> I have just one last question concerning the colors in FreeView.
> I have a fsgd file with class 1 (patients) coming first and then class
Yes, that worked Thank you.
> Have you tried rebooting your computer?
>
> Best,
> Ruopeng
>
>> On Jul 12, 2016, at 3:14 PM, pfot...@nmr.mgh.harvard.edu wrote:
>>
>> Hello FS Community,
>> Lately, whenever I am trying to use freeview I get the following error
>> message:
>>
>> freeview.bin:
Have you tried rebooting your computer?
Best,
Ruopeng
> On Jul 12, 2016, at 3:14 PM, pfot...@nmr.mgh.harvard.edu wrote:
>
> Hello FS Community,
> Lately, whenever I am trying to use freeview I get the following error
> message:
>
> freeview.bin: error while loading shared libraries:
I think you need to create 2 sets of way points as iso-lines. You can do
that from File - New Point Set and select 'way point'. Then you should
be able to use the line profile tool.
On 01/14/2015 04:55 PM, Albrecht, Daniel S. wrote:
Hello,
I'm having trouble using the line profile tool in
Hi Dan,
for the line profile you'd select a few points along one curve (e.g.
along the pial surface in a slice) , then along the opposite curve (e.g.
along the wm surface) and you can then compute line profiles connecting
the two curves (via solution of a poisson equation). the tool samples
To: Freesurfer support list
Subject: Re: [Freesurfer] Freeview question: using line profile
I think you need to create 2 sets of way points as iso-lines. You can do that
from File - New Point Set and select 'way point'. Then you should be able to
use the line profile tool.
On 01/14/2015 04:55 PM
Hi Alan
yes, this one:
https://surfer.nmr.mgh.harvard.edu/ftp/articles/fischl02-labeling.pdf
although it is based on the CMA manual definitions
cheers
Bruce
On
Fri, 6 Dec 2013, Alan Francis wrote:
Thanks Louis and Bruce. One more question: Is there any paper that outlines
the boundaries
Thanks Bruce.
On Fri, Dec 6, 2013 at 2:51 PM, Bruce Fischl fis...@nmr.mgh.harvard.eduwrote:
Hi Alan
yes, this one:
https://surfer.nmr.mgh.harvard.edu/ftp/articles/fischl02-labeling.pdf
although it is based on the CMA manual definitions
cheers
Bruce
On Fri, 6 Dec 2013, Alan Francis
Hi Alan,
You can use mri_binarize to pull it out of the aseg.mgz. FYI: Once loaded
into freeview you can also generate an isosurface for the hippocampus
label in the 3D view.
-Louis
On Thu, 5 Dec 2013, Alan Francis wrote:
Hi Bruce et al,
Is it possible to load just the Hippocampal
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