Hi Mason
not sure we can help if everything looks good in freeview. Doesn't that
make it a SamSrf issue? Or an interface between the two packages? Have you
checked with their support?
cheers
Bruce
On Thu, 26 Mar 2020, Mason Wells wrote:
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In the event th
External Email - Use Caution
In the event that Bruce might not be able to help. I ask if anyone else on the
list has experience with the problem described in this thread? Any help would
be greatly appreciated.
Best wishes,
Mason
Mason T Wells, MSc
PhD student
School of Optomet
Hi Mason
I can't tell from those images except that it looks reasonable
cheers
Bruce
On Wed, 25
Mar 2020, Mason Wells wrote:
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Hi again Bruce,
I have now installed the relevant libpng packages and have freeview open. The
segmentation doesn’t look brillian
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Hi Bruce,
I get the following error message when I try to load freeview
Setting up environment for FreeSurfer/FS-FAST (and FSL)
FREESURFER_HOME /usr/local/freesurfer
FSFAST_HOME /usr/local/freesurfer/fsfast
FSF_OUTPUT_FORMAT nii.gz
SUBJECTS_DI
something like
freeview -v $SUBJECTS_DIR//mri/norm.mgz \
-f $SUBJECTS_DIR//surf/?h.white
cheers
Bruce
On Wed, 25 Mar 2020, Mason Wells wrote:
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Hi Bruce,
Thanks for getting back to me. Sorry, but I am not sure I follow what you mean
here.
Could you pleas
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Hi Bruce,
Thanks for getting back to me. Sorry, but I am not sure I follow what you mean
here.
Could you please explain how I would check this?
Thanks again for your help.
Mason
Mason T Wells, MSc
PhD student
School of Optometry and Vision Sciences
Hi Mason
can you confirm that things look ok within FreeSurfer if you look at the
surface over the volume in freeview?
cheers
Bruce
On Wed, 25 Mar 2020, Mason Wells wrote:
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Hello Freesurfer developers,
I am using Freesurfer and SamSrf for prf
