External Email - Use Caution
Thank you Andrew, that did it.
-Dustin
From: freesurfer-boun...@nmr.mgh.harvard.edu
On Behalf Of Hoopes, Andrew
Sent: Wednesday, November 27, 2019 10:01 AM
To: Freesurfer support list
Subject: Re: [Freesurfer] freeview parallelized binary
Hi Dustin,
The freeview binaries that we ship are the same binaries installed on the
cluster. You should try specifying the number of threads available to openmp by
setting the OMP_NUM_THREADS env variable to something like 4 or 8 on your local
machine to see if this makes a difference.
Best,
Andrew
From:
mailto:freesurfer-boun...@nmr.mgh.harvard.edu>>
on behalf of "Clark, Dustin Christopher"
mailto:clar...@bu.edu>>
Reply-To: FS Help
mailto:freesurfer@nmr.mgh.harvard.edu>>
Date: Tuesday, November 26, 2019 at 9:43 AM
To: FS Help
mailto:freesurfer@nmr.mgh.harvard.edu>>
Subject: [Freesurfer] freeview parallelized binary
External Email - Use Caution
Hello,
We recently noticed freeview on the MGH cluster was using multiple cores when
loading niftis, however, our local installation only uses one core when loading
the same nifiti. Is it possible to get access to this freeview binary or the
source code to build it for parallelization on our system? Thank you,
Dustin Clark
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