Dear Galaxy-Dev
I was hoping to see if anybody had any suggestions to resolve this error.
To summarize, I'm using cloudman/Amazon EC2.
I typically batch analyze 20-100 data sets against a workflow. (launched
serially using bioblend script)
I'm consistently seeing the following error "An error oc
What version of Python are you using? I believe Python 2.7 is the recommend
version. I suggest you grab a fresh copy of galaxy from the stable branch
and try again.
--
Adam Brenner
Computer Science, Undergraduate Student
Donald Bren School of Information and Computer Sciences
Research Computing S
Thanks Adam when I specify handlers it works fine :)
I also try to add a drmaa plugin and create a new destination:
load="galaxy.jobs.runners.local:LocalJobRunner"/>
load="galaxy.jobs.runners.drmaa:DRMAAJobRunner"/>
The only other relevant place is the User object in model/__init__.py
--
James Taylor, Assistant Professor, Biology/CS, Emory University
On Thu, May 2, 2013 at 6:46 PM, Vipin TS wrote:
> I have updated the table schema from the script to adjust the column length
> from the following script:
> l
Hi folks,
First of all, I really love the new job configuration style. It makes it very
easy to change swaths of jobs and to streamline the way jobs are submitted to
the cluster. I had no issues with the dynamic runner and I like the way that
tags interact. My question is for the dynamic job ru
Hey Olivia,
The changes are now available in the stable branch of galaxy-central. You
can pull these to your local galaxy-dist repository using:
hg pull -u -b stable https://bitbucket.org/galaxy/galaxy-central/
-Dannon
On Fri, May 3, 2013 at 4:07 AM, Olivia Doppelt wrote:
> Dear developpers,
Dear developpers,
Last week we made an update on the default branch of galaxy-dist.
Some problems concerning the api were detected and resolved thanks to
Dannon Baker by pulling the stable branch.
However, a very interesting fonctionality was working well on this default
branch, concerning the mu
Dear All,
i am installing galaxy first time.
i face problem while installing the python eggs.
while running the Run.sh command it gives as
/home/sbsuser/.python-eggs/pysam-0.4.2_kanwei_b10f6e722e9a-py2.6-linux-x86_64-ucs4.egg-tmp/csamtools.so:6:
RuntimeWarning: __builtin__.file size changed, may
