[galaxy-dev] GATK - Depth of Coverage Error

2013-08-15 Thread Can Holyavkin
ls/gatk/gatk_wrapper.py", line 9 I searched the mailing list, but I couldn't find similar problem that posted before. How can I solve it? Should I install GATK seperately on Galaxy? or anything else? Can Holyavkin PhD Student Istanb

Re: [galaxy-dev] One small problem for experts, one giant question for me..

2013-08-12 Thread Can Holyavkin
Dear Bjoern, I was using ubuntu with Turkish language. Your answer gave me clue about the problem. Turkish language contains some special characters that may confuse Galaxy. So, I turned it into English. Voila! Problem solved. :) Thank you so much Bjoern. :) You are the best! Can Holyavkin

[galaxy-dev] One small problem for experts, one giant question for me..

2013-08-09 Thread Can Holyavkin
ee Software Foundation, Inc.\nLisans GPLv3+: GNU GPL s\xc3\xbcr\xc3\xbcm 3 ve sonras\xc4\xb1 <http://gnu.org/licenses/gpl.html>.\nBu \xc3\x96zg\xc3\xbcr bir yaz\xc4\xb1l\xc4\xb1md\xc4\xb1r: de\xc4\x9fi\xc5\x9ftirmek ve da\xc4\x9f\xc4\xb1tmakta \xc3\xb6zg\xc3\xbcrs\xc3\xbcn\xc3\xbcz.\nYasalar