Re: [galaxy-dev] troubleshooting Galaxy with LSF

2014-06-13 Thread I Kozin
The problem seems to be with DRMAA for Python. While it works fine on the OpenSuse 12.1 box, I'm getting a segfault on RH 6.4. Surprisingly, the job however gets submitted and run successfully. ___ Please keep all replies on the list by using

[galaxy-dev] troubleshooting Galaxy with LSF

2014-06-10 Thread I Kozin
Hello, This is largely a repost from the biostar forum following the suggestion there to post here. I'm doing my first steps in setting up a Galaxy server with an LSF job scheduler. Recently LSF started supporting DRMAA again so I decided to give it a go. I have two setups. The one that works is