Re: [galaxy-dev] [CONTENT] Re: Parallelism-enabled NCBI BLAST+ blastn does not appear to complete

2014-02-26 Thread Sanka, Ravi
Hi Peter, This galaxy instance is connected to our SGE, and all jobs get run on it. When we started this particular job, and it was the only job running, 4 of the 10 tasks it was split to were able to run simultaneously, which we viewed with qstat. But after those four completed successfully,

Re: [galaxy-dev] [CONTENT] Re: Parallelism-enabled NCBI BLAST+ blastn does not appear to complete

2014-02-26 Thread Peter Cock
Hmm. This could be related to the problem Bjoern recently reported, which Nate says was partly addressed in a recent fix: http://lists.bx.psu.edu/pipermail/galaxy-dev/2014-February/018367.html http://lists.bx.psu.edu/pipermail/galaxy-dev/2014-February/018382.html What version of Galaxy do you