Re: [galaxy-dev] Creating a galaxy tool in R - You must not use 8-bit bytestrings

2012-04-26 Thread Hans-Rudolf Hotz
Hi Dan I added this to my Rscript_wrapper.sh script and all is well. I am happy to hear that and don't worry about answering my own question. There are always other people on the list which will learn from the comments and/or find the solution later in the mail archive ;) regards,

Re: [galaxy-dev] Creating a galaxy tool in R - You must not use 8-bit bytestrings

2012-04-25 Thread Hans-Rudolf Hotz
Hi Dan There seems to be several issues connected with each other or not, I don't know. - Let's start with the 'curiosity': Do you get this problem with any tool? Does it also happen with a 'simple' (ie not using R) tool you add? - When you execute your R script on the command

Re: [galaxy-dev] Creating a galaxy tool in R - You must not use 8-bit bytestrings

2012-04-25 Thread Dan Tenenbaum
Hello Hans-Rudolph, On Wed, Apr 25, 2012 at 1:37 AM, Hans-Rudolf Hotz h...@fmi.ch wrote: Hi Dan There seems to be several issues connected with each other or not, I don't know. - Let's start with the 'curiosity': Do you get this problem with any  tool? No. And, I should be a bit

Re: [galaxy-dev] Creating a galaxy tool in R - You must not use 8-bit bytestrings

2012-04-25 Thread Dan Tenenbaum
On Wed, Apr 25, 2012 at 9:53 AM, Dan Tenenbaum dtene...@fhcrc.org wrote: Hello Hans-Rudolph, On Wed, Apr 25, 2012 at 1:37 AM, Hans-Rudolf Hotz h...@fmi.ch wrote: Hi Dan There seems to be several issues connected with each other or not, I don't know. - Let's start with the

Re: [galaxy-dev] Creating a galaxy tool in R - You must not use 8-bit bytestrings

2012-04-25 Thread Dan Tenenbaum
On Wed, Apr 25, 2012 at 11:48 AM, Dan Tenenbaum dtene...@fhcrc.org wrote: On Wed, Apr 25, 2012 at 9:53 AM, Dan Tenenbaum dtene...@fhcrc.org wrote: Hello Hans-Rudolph, On Wed, Apr 25, 2012 at 1:37 AM, Hans-Rudolf Hotz h...@fmi.ch wrote: Hi Dan There seems to be several issues connected with

[galaxy-dev] Creating a galaxy tool in R - You must not use 8-bit bytestrings

2012-04-24 Thread Dan Tenenbaum
Apologies for originally posting this to galaxy-user; now I realize it belongs here. Hello, I'm a galaxy newbie and running into several issues trying to adapt an R script to be a galaxy tool. I'm looking at the XY plotting tool for guidance (tools/plot/xy_plot.xml), but I decided not to embed