Hi Ira,
is it still working for you?
I installed one repository in a fresh installation and executed:
export
GALAXY_TOOL_DEPENDENCY_DIR=/home/bag/projects/galaxy/galaxy-central/tool_deps/
; sh run_functional_tests.sh -installed
It failed with:
Failed to resolve dependency on 'SCRIPT_PATH',
Ira,
Yes, I should have mentioned that due to the way functional tests are
executed, an environment variable needs to be explicitly exported before
the functional test framework will recognize it. The syntax is very
nearly the same:
export
Oops ... I should have thought of that
Thanks .. it works now.
Ira
On 04/06/2013, at 11:20 PM, Dave Bouvier d...@bx.psu.edu wrote:
Ira,
Yes, I should have mentioned that due to the way functional tests are
executed, an environment variable needs to be explicitly exported before the
Hi Dave,
Just following up on this (now quite a bit later sorry).
I can't seem to get things to work using your suggested workaround.
Using a fresh checkout of galaxy-central 9931:716f29e4c77d
I run
GALAXY_TOOL_DEPENDENCY_DIR=/home/iracooke/tool_dependencies sh
run_functional_tests.sh
Ira,
There is a known issue with resolving tool dependencies when running
functional tests. One workaround is to set the
GALAXY_TOOL_DEPENDENCY_DIR environment variable to the path configured
in your universe_wsgi.ini.
This issue is documented in https://trello.com/c/eVT3QWJF
--Dave B.
This only affects tests that are run manually, the automated testing
framework correctly resolves tool dependencies.
--Dave B.
On 5/9/13 10:41:22.000, Peter Cock wrote:
On 5/8/13 20:08:08.000, Ira Cooke wrote:
Hi All,
I'm starting to add functional tests to my tools but I've found that
