Re: [galaxy-dev] RFC: Cheetah template in tool_dependencies.xml

2013-07-23 Thread Dave Bouvier
Björn, I've uploaded the modified tool_dependencies.xml to devteam's package_emboss_5_0_0 repository on the test tool shed, and verified that it works. Again, thank you for your contributions. --Dave B. On 7/7/13 18:59:57.000, Björn Grüning wrote: Hi Greg, bitbucket has a downtime so I

Re: [galaxy-dev] RFC: Cheetah template in tool_dependencies.xml

2013-07-23 Thread Björn Grüning
Hi Dave, Björn, I've uploaded the modified tool_dependencies.xml to devteam's package_emboss_5_0_0 repository on the test tool shed, and verified that it works. Again, thank you for your contributions. Great, thanks! --Dave B. On 7/7/13 18:59:57.000, Björn Grüning wrote: Hi

Re: [galaxy-dev] RFC: Cheetah template in tool_dependencies.xml

2013-07-08 Thread James Taylor
It probably makes sense to specify the template type in this case. Maybe an additional attribute, language='cheetah' ? On Sun, Jul 7, 2013 at 1:19 PM, Björn Grüning bjoern.gruen...@pharmazie.uni-freiburg.de wrote: action type=template_command #if env.get('X11_LIB_DIR', False) and

Re: [galaxy-dev] RFC: Cheetah template in tool_dependencies.xml

2013-07-08 Thread Björn Grüning
Hi James, It probably makes sense to specify the template type in this case. Maybe an additional attribute, language='cheetah' ? My first suggestion was action type=cheetah_command to reflect the template engine. I'm fine with both. On Sun, Jul 7, 2013 at 1:19 PM, Björn Grüning

Re: [galaxy-dev] RFC: Cheetah template in tool_dependencies.xml

2013-07-08 Thread Greg Von Kuster
I'll soon be committing a slightly altered version of your patch which includes a language attribute for the template_command action type. On Jul 8, 2013, at 10:02 AM, Björn Grüning bjoern.gruen...@pharmazie.uni-freiburg.de wrote: Hi James, It probably makes sense to specify the template

Re: [galaxy-dev] RFC: Cheetah template in tool_dependencies.xml

2013-07-08 Thread Greg Von Kuster
Hello Björn, Thanks very much for the patch - I've committed alsightly alterered verson of it in changetset 10204:afec613d77fa which is currently running on the test tool shed. Greg Von Kuster On Jul 7, 2013, at 6:59 PM, Björn Grüning bjoern.gruen...@pharmazie.uni-freiburg.de wrote: Hi

Re: [galaxy-dev] RFC: Cheetah template in tool_dependencies.xml

2013-07-07 Thread Björn Grüning
Hi Greg, bitbucket has a downtime so I have attached a patch. I will create tomorrow a pull request if I find time. It will work as described and we have now a new variable (__is64bit__) that we can use to determine if python is running under 64bit (assuming that the rest is also 64bit-ish).