Re: [galaxy-dev] Rpy-1.0.3 and R-2.13.1

2011-09-22 Thread Oleksandr Moskalenko
Just for reference in case anyone runs into this problem here is my personal installation log: Build R with the following additions: Configuration: Edit the config.site file and add the CFLAGS= -g -02 -fPIC Run: ./configure --prefix=/apps/R/2.13.1 --enable-R-shlib Run: make; make install Copy th

Re: [galaxy-dev] Rpy-1.0.3 and R-2.13.1

2011-09-22 Thread Oleksandr Moskalenko
On Sep 22, 2011, at 1:56 PM, Assaf Gordon wrote: > Hello, > > It seems this issue (rpy) pops up every now and then: > Has anyone managed to get rpy-1.0.3 working properly with R-13.1 (including > loading packages) ? I already replied to Assaf, so this is a list copy. Yes, this combination wo

[galaxy-dev] Rpy-1.0.3 and R-2.13.1

2011-09-22 Thread Assaf Gordon
Hello, It seems this issue (rpy) pops up every now and then: Has anyone managed to get rpy-1.0.3 working properly with R-13.1 (including loading packages) ? After compiling R-2.13.1 from source, and recompiling rpy-1.0.3, I get the following error when trying to load an R module through rpy: ==