[galaxy-dev] Running Jobs:

2013-08-13 Thread Jurgens de Bruin
Hey All, Apologies for all the questions on the mailing list...I am having a lot of difficulty getting our local Galaxy working. Currently I have galaxy running but when I try run a job it just stays on Job is waiting to run and never runs. I have read the guide and wiki but can't seem to solve

Re: [galaxy-dev] Running jobs as real user and extra_file_path

2013-03-20 Thread Peter Cock
On Mon, Apr 30, 2012 at 4:47 PM, Nate Coraor n...@bx.psu.edu wrote: On Apr 25, 2012, at 9:39 AM, Louise-Amélie Schmitt wrote: Hi everyone, I just wanted to ask how the extra_file_path is handled in case of job running as the real user since the file_path is only writable by the galaxy user.

Re: [galaxy-dev] Running jobs as real user and extra_file_path

2012-04-30 Thread Nate Coraor
On Apr 25, 2012, at 9:39 AM, Louise-Amélie Schmitt wrote: Hi everyone, I just wanted to ask how the extra_file_path is handled in case of job running as the real user since the file_path is only writable by the galaxy user. Any clue? Hi L-A, There are actually two dataset attributes for

[galaxy-dev] Running jobs as real user and extra_file_path

2012-04-25 Thread Louise-Amélie Schmitt
Hi everyone, I just wanted to ask how the extra_file_path is handled in case of job running as the real user since the file_path is only writable by the galaxy user. Any clue? Thanks, L-A ___ Please keep all replies on the list by using