Re: [galaxy-dev] Sudden error in local galaxy installation

2013-08-02 Thread Raj Ayyampalayam
After some investigating I think the problem is at the line: converted_dataset = converter.execute( trans, incoming=params, set_output_hid=visible, set_output_history=set_output_history)[1] in File /panfs/pstor.storage/home/qbcglab/galaxy_run/galaxy-dist/lib/galaxy/datatypes/data.py, line

[galaxy-dev] Sudden error in local galaxy installation

2013-08-01 Thread Raj Ayyampalayam
Hello, My local cluster based galaxy installation was running fine till this evening. Later I decided to test some workflows and got an error with massive stack trace. I can't make any sense of this. Here is the last part of the error. The stack trace is literally 1000's of lines. Can

Re: [galaxy-dev] Sudden error in local galaxy installation

2013-08-01 Thread Raj Ayyampalayam
Here is the first part of the error (Traceback): galaxy.tools ERROR 2013-08-01 22:56:16,590 Exception caught while attempting tool execution: Traceback (most recent call last): File /panfs/pstor.storage/home/qbcglab/galaxy_run/galaxy-dist/lib/galaxy/tools/__init__.py, line 1936, in