I want to frequently import many tens of thousands of datasets. The files are
on the same sever as Galaxy. But the upload based mechanism is really really
slow. It takes hours to load this many files, yet the data is not moving at all!
What is the best strategy to go about making a faster bulk import? I can
imagine a tight loop that is
My datatypes are limited.
foreach folder
new LibraryFolder
foreach file in each directory
new LibraryDataset
new LibraryDatasetDatasetAssociation
flush once at the end.
Thoughts?
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