[galaxy-dev] database upgrade crashes after upgrade to the June 3, 2013 Galaxy release

2013-06-12 Thread Christophe Antoniewski
Hi, Sorry to bother again, but we have now a problem with the last release of galaxy-dist The lack of a python module asked by a python eggs seems to interrupt our postgresql database upgrade from version '114' to '115' sh manage_db.sh upgrade Traceback (most recent call last): File

Re: [galaxy-dev] database upgrade crashes after upgrade to the June 3, 2013 Galaxy release

2013-06-12 Thread Björn Grüning
Hi Christophe, can you try to update to the latest revision? It is fixed here: https://bitbucket.org/galaxy/galaxy-central/commits/47b86d6a9077facb54804576be49ca545d18bd4e Cheers, Bjoern Hi, Sorry to bother again, but we have now a problem with the last release of galaxy-dist The lack

Re: [galaxy-dev] database upgrade crashes after upgrade to the June 3, 2013 Galaxy release

2013-06-12 Thread Christophe Antoniewski
Thank you so much Björn, I made the change of the file directly by hand (not sure to be able to cleanly switch to default from stable with the new mercurial mode) and it worked. Chris 2013/6/12 Björn Grüning bjoern.gruen...@pharmazie.uni-freiburg.de Hi Christophe, can you try to update to

Re: [galaxy-dev] database upgrade crashes after upgrade to the June 3, 2013 Galaxy release

2013-06-12 Thread Dannon Baker
Christophe, Glad it's working. The updates should merge seamlessly so you shouldn't need to do anything else when you update again. That said, for future use, you can swap branches like: 'hg update stable' to swap to the stable branch. If you're on galaxy-dist, you can still pull (and update)