Re: [galaxy-dev] samtools version detection issue

2012-01-20 Thread Nate Coraor
On Jan 20, 2012, at 12:12 AM, ambarish biswas wrote: Hi, I'm not sure if this is related or not but I'm also noticed a similar problem where the program is not found in the path, but it exists. I have it submitted as an issue , but it could be related here so mentioned here. The problem

Re: [galaxy-dev] samtools version detection issue

2012-01-19 Thread Nate Coraor
On Jan 18, 2012, at 5:28 PM, Matt Shirley wrote: Hi all. I'm sorry if this has been answered before, but I've searched and cannot find a solution other than add SAMtools to your PATH, which I already have done. I can invoke samtools from BASH while logged in as the galaxy user I set up