Hi all,
Is there any documentation on what Galaxy means by the different qual formats?
In particular why is there a qual454 and not a qualsanger (to match fastq)?
Historically QUAL files were used back in Sanger/capillary sequencing
by PHRED, and just hold PHRED scores as integers. This was
Sarah Diehl wrote:
Hi all,
I'm currently working on setting up a fresh Galaxy server at our
institute. I'm going through the tool dependencies list and install
everything on it. I installed the latest R version (2.12.2) and now
I'm trying to install rpy. With some workarounds I managed to
Hi Nate,
thank you very much for your help! I managed to figure out the problem.
There seemed to be an old version of R and somehow (I still don't know
how) the rpy installation did only find the old one. I hard-coded the
directory of the new R in the setup.py (everything else failed) and
Hopefully this will be of interest to some of you...
-- Forwarded message --
From: Nomi Harris nlhar...@lbl.gov
Date: Thu, Mar 3, 2011 at 7:37 PM
Subject: [Bosc] Bioinformatics Open Source Conference (BOSC
2011)--Call for Abstracts
To: bosc-annou...@lists.open-bio.org,
