-- Forwarded message --
From: shashi shekhar meshash...@gmail.com
Date: Tue, Jul 19, 2011 at 3:41 PM
Subject: Status of Job after log out
To: shashi shekhar meshash...@gmail.com
Hi all,
I took one job which takes long time to run . In galaxy, this job was
submitted . After
Hi Nick,
Thank you! Although there was a tiny error in there with base_panels ;)
For the future, yes, please shoot an email to galaxy-dev and either
create a bitbucket issue with the patch, or have a link to the pull
request.
Thanks,
K
On Tue, Jul 19, 2011 at 11:25 AM, Nick Semenkovich
I took a look and it's a great start. I can work on it 1d/wk. I'll email
you again after I push my revisions to the toolshed. Or email me anytime
you want me to push whatever I've got at that time.
Thanks,
Ed
On Sun, Jul 17, 2011 at 8:39 AM, Jim Johnson johns...@umn.edu wrote:
Ed,
I
Hello Shashi,
Jobs are associated with the history and your Galaxy account. These are
persistent, even when you may be logged out.
Hopefully this helps,
Best,
Jen
Galaxy team
On 7/19/11 3:11 AM, shashi shekhar wrote:
-- Forwarded message --
From: *shashi shekhar*
Hello Ed,
This one was tough to track down, but I believe I have it resolved. On Linux,
the mercurial api's call to commit seems to bump into issues intermittently,
throws an exception, and rolls back the transaction. Although I can reproduce
it on Linux, I cannot produce this behavior on a
Hi all,
I got around to writing the report I always needed: how much time each job
actually runs and how much time it spends waiting in the SGE queue.
The attached shell script produces the report, combining information from SGE's
QACCT with the galaxy job/dataset information.
The output
Awesome. I've added this as:
https://bitbucket.org/galaxy/galaxy-central/issue/615/galaxy-wiki-links-are-outdated
On Tue, Jul 19, 2011 at 10:56 AM, Kanwei Li kan...@gmail.com wrote:
Hi Nick,
Thank you! Although there was a tiny error in there with base_panels ;)
For the future, yes, please
Chan,
When you go directly to the URL specified for importing (the for_direct_import
one in the error message from your screenshot) what do you see? Is the
workflow listed as being accessible, when you go to Download or Export?
-Dannon
On Jul 18, 2011, at 2:45 AM, chan fook mun wrote:
Hi
besides using libraries, you can create a tool to add files from nfs path
which merely symlinks the file. while libraries are nice, i haven't figured
out how to automatically import libraries, so i created a tool for users to
import sequence data using their run id (i.e. in our lims).
On Tue,
Hi Gordon,
Very nice! Do you think it would be helpful to add this into the Tool
Shed for sharing? I didn't see it there, so apologies if you already added!
Best,
Jen
Galaxy team
On 7/19/11 11:45 AM, Assaf Gordon wrote:
Hi all,
I got around to writing the report I always needed: how much
Hi, Alison
I've made some fixes to the Manhattan/QQ tool (galaxy-central revision
#dacf97a6c663) so it now handles your data - thanks again for
discovering these edge cases - the revised code is now available and
working on http://test.g2.bx.psu.edu/ where your data produces plots.
In particular
11 matches
Mail list logo
